1. Analysis of High-Throughput Sequencing Data
Shrinivasrao P. Mane, Thero Modise, and Bruno W. Sobral
2. Identification of Plant MicroRNAs Using Expressed Sequence Tag Analysis
Taylor P. Frazier and Baohong Zhang
3. Microarray Data Analysis
Saroj K. Mohapatra and Arjun Krishnan
4. Setting Up Reverse Transcription Quantitative-PCR Experiments
Madana M.R. Ambavaram and Andy Pereira
5. Virus-Induced Gene Silencing in Nicotiana benthamiana and Other Plant Species
Andrew Hayward, Meenu Padmanabhan, and S. P. Dinesh-Kumar
6. Agroinoculation and Agroinfiltration: Simple Tools for Complex Gene Function Analyses
Zarir Vaghchhipawala, Clemencia M. Rojas, Muthappa Senthil-Kumar, and Kirankumar S. Mysore
7. Full-Length cDNA Overexpressor Gene Hunting System (FOX Hunting System)
Mieko Higuchi, Youichi Kondou, Takanari Ichikawa, and Minami Matsui
8. Activation Tagging with En/Spm-I/dSpm Transposons in Arabidopsis
Nayelli Marsch-Martínez and Andy Pereira
9. Activation Tagging and Insertional Mutagenesis in Barley
Michael A. Ayliffe and Anthony J. Pryor
10. Methods for Rice Phenomics Studies
Chyr-Guan Chern, Ming-Jen Fan, Sheng-Chung Huang, Su-May Yu, Fu-Jin Wei,
Cheng-Chieh Wu, Arunee Trisiriroj, Ming-Hsing Lai, Shu Chen, and Yue-Ie C. Hsing
11. Development of an Efficient Inverse PCR Method for Isolating Gene Tags from T-DNA Insertional Mutants in Rice
Sung-Ryul Kim, Jong-Seong Jeon, and Gynheung An
12. Transposon Insertional Mutagenesis in Rice
Narayana M. Upadhyaya, Qian-Hao Zhu, and Ramesh S. Bhat
13. Reverse Genetics in Medicago truncatula Using Tnt1 Insertion Mutants
Xiaofei Cheng, Jiangqi Wen, Million Tadege, Pascal Ratet, and Kirankumar S. Mysore
14. Screening Arabidopsis Genotypes for Drought Stress Resistance
Amal Harb and Andy Pereira
15. Protein Tagging for Chromatin Immunoprecipitation (ChIP) from Arabidopsis
Stefan de Folter
16. Yeast One-Hybrid Screens for Detection of Transcription Factor DNA Interactions
Pieter B.F. Ouwerkerk and Annemarie H. Meijer
17. Plant Metabolomics by GC-MS and Differential Analysis
Joel L. Shuman, Diego F. Cortes, Jenny M. Armenta, Revonda M. Pokrzywa, Pedro Mendes, and Vladimir Shulaev
18. Gramene Database: A Hub for Comparative Plant Genomics
Pankaj Jaiswal
