Part I: Metabolites and Metabolic Fluxes
1. MeRy-B, a Metabolomic Database and Knowledge Base for Exploring Plant Primary Metabolism
Catherine Deborde and Daniel Jacob
2. Targeted Deuteration of Polyphenolics for their Qualitative and Quantitative Metabolomic Analysis in Plant-Derived Extracts
Mikel R. Roe, Jerry D. Cohen, and Adrian D. Hegeman
3. Relative Quantitation in Single Cell Metabolomics by Laser Ablation Electrospray Mass Spectrometry
Bindesh Shrestha and Akos Vertes
4. Quantification of Plant Volatiles
Anthony V. Qualley and Natalia Dudareva
5. Quantitative Imaging Approaches for Small Molecule Measurements using FRET Sensors in Plants
Sakiko Okumoto
6. Isotopomer Measurement Techniques in Metabolic Flux Analysis I: Nuclear Magnetic Resonance
Quyen X. Truong, Jong Moon Yoon, and Jacqueline V. Shanks
7. Isotopomer Measurement Techniques in Metabolic Flux Analysis II: Mass Spectrometry
Jamey D. Young, Douglas K. Allen, and John A. Morgan
8. Mathematical Modeling of Isotope Labeling Experiments for Metabolic Flux AnalysisShilpa Nargund and Ganesh Sriram
9. Optimal Design of Isotope Labeling Experiments
Hong Yang, Dominic E Mandy and Igor GL Libourel
Part II: Metabolic Pathways and Metabolic Systems Biology
10. Putting the Plant Metabolic Network Pathway Databases to Work: Going Offline to Gain New Capabilities
Kate Dreher
11. Elucidation of Metabolic Pathways from Enzyme Classification Data
Andrew G. McDonald and Keith F. Tipton
12. Deducing Intracellular Distributions of Metabolic Pathways from Genomic Data
Ansgar Gruber and Peter G. Kroth
13. Genome-scale Models of Plant MetabolismMargaret Simons, Ashish Misra, and Ganesh Sriram
14. Elementary Flux Modes, Flux Balance Analysis and their Application to Plant MetabolismKatrin Lotz, Anja Hartmann, Eva Grafahrend-Belau, Falk Schreiber, and Björn H. Junker
15. Systems Approaches to Unraveling Plant Metabolism: Identifying Biosynthetic Genes of Secondary Metabolic Pathways
Martin J. Spiering, Bhavneet Kaur, James F. Parsons, and Edward Eisenstein
16. Applications of Kinetic Modeling to
Plant Metabolism
Johann M. Rohwer
17. Kinetic Modeling of Plant Metabolism and its Predictive Power - Peppermint Essential Oil Biosynthesis as an Example
Bernd Markus Lange and Rigoberto Rios-Estepa
